UNAGI.dynamic_graphs.buildGraph.nodesDistance

UNAGI.dynamic_graphs.buildGraph.nodesDistance(rep1, rep2, topgene1, topgene2)[source]

calculate the distance between two stages

Parameters:

  • rep1 (list) – The representation of clusters in stage 1

  • rep2 (list) – The representation of clusters in stage 2

  • topgene1 (list) – Top 100 differential gene of clusters in stage 1

  • topgene2 (list) – Top 100 differential gene of clusters in stage 2

Returns:

distance (list) – A list of normalized distance of clusters between two stages