UNAGI.plotting.plot_cell_embeddings.plot_with_colormap

UNAGI.plotting.plot_cell_embeddings.plot_with_colormap(values, color_dict)[source]

The color scheme the cell types are plotted with.

Parameters:

  • values (list) – List of cell types.

  • color_dict (dict) – Dictionary of cell types and their colors.

Returns:

color_dict (dict) – Dictionary of cell types and their colors.