All modules for which code is available

• UNAGI.UNAGI_analyst
• UNAGI.UNAGI_tool
• UNAGI.dynamic_graphs.buildGraph
• UNAGI.dynamic_graphs.distDistance
• UNAGI.dynamic_regulatory_networks.processIDREM
• UNAGI.dynamic_regulatory_networks.processTFs
• UNAGI.marker_discovery.dynamic_markers
• UNAGI.marker_discovery.hierachical_static_markers
• UNAGI.perturbations.analysis_perturbation
• UNAGI.perturbations.compounds
• UNAGI.perturbations.pathways
• UNAGI.perturbations.speedup_perturbation
• UNAGI.plotting.plot_cell_embeddings
• UNAGI.plotting.plot_cell_type_composition
• UNAGI.plotting.plot_hierarchical_markers_heatmap
• UNAGI.plotting.plot_stage_dendrogram
• UNAGI.train.runner
• UNAGI.train.trainer