UNAGI launcher

The UNAGI class is the main class of UNAGI. It contains the function to prepare the data, start the model training and start analysing the perturbation results.

UNAGI.UNAGI_tool.UNAGI.setup_data	The function to specify the data directory, the attribute name of the stage information and the total number of time stages of the time-series single-cell data.
UNAGI.UNAGI_tool.UNAGI.setup_training	Set up the training parameters and the model parameters.
UNAGI.UNAGI_tool.UNAGI.calculate_neighbor_graph	The function to calculate the cell graphs for each stage.
UNAGI.UNAGI_tool.UNAGI.register_CPO_parameters	The function to register the parameters for the CPO analysis.
UNAGI.UNAGI_tool.UNAGI.register_iDREM_parameters	The function to register the parameters for the iDREM analysis.
UNAGI.UNAGI_tool.UNAGI.register_species	The function to register the species of the single-cell data.
UNAGI.UNAGI_tool.UNAGI.run_UNAGI	The function to launch the model training.